Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA3P32297 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AC138649.2-201ENST00000615886 705 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 CR392039.2-201ENST00000623182 509 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA3P32297 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AL355102.3-201ENST00000554299 1678 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 AP002761.4-201ENST00000565433 3361 ntBASIC14.92□□□□□ -0.02
CHRNA3P32297 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA3P32297 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA3P32297 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA3P32297 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 AC016700.1-201ENST00000429424 312 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 AC012441.2-201ENST00000444843 739 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 KLF2P1-201ENST00000447438 1042 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 AC104073.2-201ENST00000453737 312 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 KRT18P15-201ENST00000458108 1291 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.91□□□□□ -0.02
CHRNA3P32297 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNA3P32297 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNA3P32297 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNA3P32297 AL008718.2-201ENST00000609206 1313 ntBASIC14.91□□□□□ -0.02
CHRNA3P32297 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA3P32297 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 RPL18P13-201ENST00000478088 569 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms