Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.42■□□□□ 0.06
CTGFP29279 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 RPL10P8-201ENST00000522888 313 ntBASIC15.42■□□□□ 0.06
CTGFP29279 PIGCP1-201ENST00000527583 895 ntBASIC15.42■□□□□ 0.06
CTGFP29279 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC15.42■□□□□ 0.06
CTGFP29279 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CTGFP29279 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTGFP29279 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 AC092384.3-202ENST00000564646 2873 ntBASIC15.42■□□□□ 0.06
CTGFP29279 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTGFP29279 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CTGFP29279 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 HSPA7-201ENST00000445535 1927 ntBASIC15.41■□□□□ 0.06
CTGFP29279 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 WDR54-202ENST00000409791 854 ntTSL 3 BASIC15.41■□□□□ 0.06
CTGFP29279 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC15.41■□□□□ 0.06
CTGFP29279 AC105443.1-201ENST00000433754 712 ntBASIC15.41■□□□□ 0.06
CTGFP29279 HNRNPA1P3-201ENST00000440968 551 ntBASIC15.41■□□□□ 0.06
CTGFP29279 YBX1P3-201ENST00000468366 909 ntBASIC15.41■□□□□ 0.06
CTGFP29279 RN7SL47P-201ENST00000488710 299 ntBASIC15.41■□□□□ 0.06
CTGFP29279 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
CTGFP29279 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.41■□□□□ 0.06
CTGFP29279 NAT9-204ENST00000578822 839 ntTSL 3 BASIC15.41■□□□□ 0.06
CTGFP29279 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC15.41■□□□□ 0.06
CTGFP29279 AC022001.3-201ENST00000606330 596 ntBASIC15.41■□□□□ 0.06
CTGFP29279 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CTGFP29279 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
CTGFP29279 AC106785.2-201ENST00000564385 1319 ntBASIC15.41■□□□□ 0.06
CTGFP29279 SIGLEC20P-201ENST00000595243 1311 ntBASIC15.41■□□□□ 0.06
CTGFP29279 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTGFP29279 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTGFP29279 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
CTGFP29279 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CTGFP29279 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CTGFP29279 AC097359.2-201ENST00000604992 2389 ntBASIC15.4■□□□□ 0.06
CTGFP29279 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTGFP29279 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
CTGFP29279 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTGFP29279 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTGFP29279 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTGFP29279 RNA5SP84-201ENST00000364740 107 ntBASIC15.4■□□□□ 0.06
CTGFP29279 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.4■□□□□ 0.06
CTGFP29279 MIR1226-201ENST00000408658 75 ntBASIC15.4■□□□□ 0.06
CTGFP29279 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms