Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN2P17655 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN2P17655 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CAPN2P17655 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN2P17655 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN2P17655 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 AL137783.1-201ENST00000623494 1896 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN2P17655 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN2P17655 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 AC098934.1-203ENST00000442868 1262 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 AL451000.1-201ENST00000451300 1186 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 GNG10P1-201ENST00000452289 199 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 GCOM2-201ENST00000509133 1104 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN2P17655 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 AC068831.5-201ENST00000557387 328 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 MME-218ENST00000625667 363 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 TEKT4P2-202ENST00000559466 1312 ntBASIC16.34■□□□□ 0.21
CAPN2P17655 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPN2P17655 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN2P17655 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN2P17655 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN2P17655 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN2P17655 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPN2P17655 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN2P17655 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN2P17655 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CAPN2P17655 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPN2P17655 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CAPN2P17655 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CAPN2P17655 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CAPN2P17655 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CAPN2P17655 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CAPN2P17655 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 AC026410.1-201ENST00000507366 1101 ntBASIC16.33■□□□□ 0.2
CAPN2P17655 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN2P17655 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPN2P17655 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 RN7SL665P-201ENST00000578793 300 ntBASIC16.33■□□□□ 0.2
CAPN2P17655 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CAPN2P17655 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.33■□□□□ 0.2
CAPN2P17655 AC005041.3-201ENST00000606287 649 ntBASIC16.33■□□□□ 0.2
CAPN2P17655 AL022334.2-201ENST00000610000 484 ntBASIC16.33■□□□□ 0.2
CAPN2P17655 AC002044.2-201ENST00000624910 970 ntBASIC16.33■□□□□ 0.2
CAPN2P17655 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPN2P17655 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms