Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1DP16402 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1DP16402 CYMP-203ENST00000474680 1263 ntBASIC12□□□□□ -0.49
HIST1H1DP16402 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1DP16402 AC078819.1-201ENST00000547454 765 ntBASIC12□□□□□ -0.49
HIST1H1DP16402 AC012085.1-201ENST00000548270 765 ntBASIC12□□□□□ -0.49
HIST1H1DP16402 AC190387.1-201ENST00000551683 408 ntBASIC12□□□□□ -0.49
HIST1H1DP16402 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1DP16402 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1DP16402 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1DP16402 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1DP16402 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1DP16402 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1DP16402 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
HIST1H1DP16402 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1DP16402 ZNF493-208ENST00000599461 1769 ntBASIC12□□□□□ -0.49
HIST1H1DP16402 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1DP16402 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 FMO6P-201ENST00000236166 1620 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PI4KAP2-201ENST00000360806 2080 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 AP003969.2-201ENST00000623739 2275 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PTPRVP-205ENST00000641549 5067 ntBASIC11.99□□□□□ -0.49
HIST1H1DP16402 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HIST1H1DP16402 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1DP16402 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1DP16402 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1DP16402 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1DP16402 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1DP16402 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms