Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P04436 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04436 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
P04436 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.88□□□□□ -0.35
P04436 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P04436 FAM45BP-202ENST00000592932 1624 ntBASIC12.88□□□□□ -0.35
P04436 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04436 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.88□□□□□ -0.35
P04436 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04436 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04436 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P04436 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P04436 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 AC068760.1-201ENST00000493579 1953 ntBASIC12.87□□□□□ -0.35
P04436 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.87□□□□□ -0.35
P04436 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.87□□□□□ -0.35
P04436 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.87□□□□□ -0.35
P04436 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
P04436 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.87□□□□□ -0.35
P04436 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.87□□□□□ -0.35
P04436 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.87□□□□□ -0.35
P04436 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.87□□□□□ -0.35
P04436 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.87□□□□□ -0.35
P04436 AC008267.1-201ENST00000474858 1069 ntBASIC12.87□□□□□ -0.35
P04436 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.87□□□□□ -0.35
P04436 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 MIR4722-201ENST00000578292 60 ntBASIC12.87□□□□□ -0.35
P04436 AC132825.4-202ENST00000578792 434 ntBASIC12.87□□□□□ -0.35
P04436 MIR3180-2-201ENST00000581748 88 ntBASIC12.87□□□□□ -0.35
P04436 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.87□□□□□ -0.35
P04436 AP005264.5-201ENST00000590066 467 ntBASIC12.87□□□□□ -0.35
P04436 AC087045.2-201ENST00000606279 1003 ntBASIC12.87□□□□□ -0.35
P04436 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
P04436 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.87□□□□□ -0.35
P04436 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P04436 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.87□□□□□ -0.35
P04436 KRT8P18-201ENST00000413425 1445 ntBASIC12.87□□□□□ -0.35
P04436 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04436 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
P04436 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P04436 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 KRT8P43-201ENST00000406052 1458 ntBASIC12.86□□□□□ -0.35
P04436 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.86□□□□□ -0.35
P04436 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
P04436 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.86□□□□□ -0.35
P04436 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.86□□□□□ -0.35
P04436 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
P04436 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 RN7SKP109-201ENST00000410592 316 ntBASIC12.86□□□□□ -0.35
P04436 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.86□□□□□ -0.35
P04436 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04436 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms