Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 AC105206.1-202ENST00000314927 2368 ntBASIC14.82□□□□□ -0.04
APOEP02649 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 CICP17-201ENST00000418553 2377 ntBASIC14.82□□□□□ -0.04
APOEP02649 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
APOEP02649 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.82□□□□□ -0.04
APOEP02649 RN7SL258P-201ENST00000478664 300 ntBASIC14.82□□□□□ -0.04
APOEP02649 RN7SL720P-201ENST00000488178 304 ntBASIC14.82□□□□□ -0.04
APOEP02649 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.82□□□□□ -0.04
APOEP02649 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 AC116345.2-201ENST00000512837 523 ntBASIC14.82□□□□□ -0.04
APOEP02649 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 RTN3P1-201ENST00000536295 711 ntBASIC14.82□□□□□ -0.04
APOEP02649 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 MIR4754-201ENST00000582477 89 ntBASIC14.82□□□□□ -0.04
APOEP02649 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 AL590824.1-201ENST00000403828 1349 ntBASIC14.82□□□□□ -0.04
APOEP02649 LINC00115-201ENST00000473798 1317 ntBASIC14.82□□□□□ -0.04
APOEP02649 KRT18P9-201ENST00000604826 1300 ntBASIC14.82□□□□□ -0.04
APOEP02649 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOEP02649 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOEP02649 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.82□□□□□ -0.04
APOEP02649 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 CR383656.2-201ENST00000548656 2254 ntBASIC14.81□□□□□ -0.04
APOEP02649 AC005252.3-201ENST00000623855 2258 ntBASIC14.81□□□□□ -0.04
APOEP02649 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 BRD7P5-201ENST00000299197 1822 ntBASIC14.81□□□□□ -0.04
APOEP02649 AC111170.3-201ENST00000624282 2464 ntBASIC14.81□□□□□ -0.04
APOEP02649 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.81□□□□□ -0.04
APOEP02649 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.81□□□□□ -0.04
APOEP02649 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 AC026320.2-201ENST00000434379 478 ntBASIC14.81□□□□□ -0.04
APOEP02649 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.81□□□□□ -0.04
APOEP02649 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.81□□□□□ -0.04
APOEP02649 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.81□□□□□ -0.04
APOEP02649 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.81□□□□□ -0.04
APOEP02649 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
APOEP02649 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.81□□□□□ -0.04
APOEP02649 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.81□□□□□ -0.04
APOEP02649 FGFR3P5-201ENST00000564496 886 ntBASIC14.81□□□□□ -0.04
APOEP02649 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 AC097724.1-201ENST00000609581 426 ntBASIC14.81□□□□□ -0.04
APOEP02649 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.81□□□□□ -0.04
APOEP02649 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOEP02649 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOEP02649 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APOEP02649 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms