Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 HSPA8P9-201ENST00000485881 1943 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 TRIM80P-201ENST00000455685 2848 ntBASIC11.18□□□□□ -0.62
IFNA1P01562 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
IFNA1P01562 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 LRRC59-203ENST00000576448 1531 ntBASIC11.18□□□□□ -0.62
IFNA1P01562 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.18□□□□□ -0.62
IFNA1P01562 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
IFNA1P01562 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
IFNA1P01562 AC009093.10-201ENST00000641956 1442 ntBASIC11.18□□□□□ -0.62
IFNA1P01562 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.17□□□□□ -0.62
IFNA1P01562 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
IFNA1P01562 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
IFNA1P01562 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 HLA-J-203ENST00000494367 1087 ntBASIC11.17□□□□□ -0.62
IFNA1P01562 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.17□□□□□ -0.62
IFNA1P01562 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.17□□□□□ -0.62
IFNA1P01562 AL596442.2-201ENST00000610240 980 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms