Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 DLX4-206ENST00000611342 1662 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 KRT43P-201ENST00000434019 910 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 FAM58BP-201ENST00000439056 645 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC012441.2-201ENST00000444843 739 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AP000812.2-201ENST00000538934 718 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PGAM1P5-201ENST00000548011 764 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC105233.6-201ENST00000642093 218 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 LINC00115-201ENST00000473798 1317 ntBASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF6Q9Y4K3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CYP4F23P-201ENST00000593402 1579 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 LINC01165-201ENST00000445190 1623 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 SNORA50C-201ENST00000408535 133 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 RN7SL692P-201ENST00000464677 288 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 AC100827.2-201ENST00000563214 1194 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 SNORA50.1-201ENST00000628590 135 ntBASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF6Q9Y4K3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms