Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 MIR3940-201ENST00000579148 102 ntBASIC18.78■□□□□ 0.6
PHF8Q9UPP1 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AC040160.2-201ENST00000623816 1675 ntBASIC18.78■□□□□ 0.6
PHF8Q9UPP1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AL121753.2-201ENST00000624581 1461 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 SDCBP2P1-201ENST00000416115 614 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 RPSAP6-201ENST00000417882 882 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AC000077.1-201ENST00000420012 953 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 HLA-W-207ENST00000439514 771 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AC026412.1-206ENST00000502273 206 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 BAP1-211ENST00000615113 489 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 BX322562.1-201ENST00000617004 561 ntBASIC18.77■□□□□ 0.6
PHF8Q9UPP1 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF8Q9UPP1 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PHF8Q9UPP1 AC020910.6-201ENST00000623084 1459 ntBASIC18.77■□□□□ 0.59
PHF8Q9UPP1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PHF8Q9UPP1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PHF8Q9UPP1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHF8Q9UPP1 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 HSPA7-201ENST00000445535 1927 ntBASIC18.76■□□□□ 0.59
PHF8Q9UPP1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 RN7SKP212-201ENST00000410851 328 ntBASIC18.76■□□□□ 0.59
PHF8Q9UPP1 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 AC005077.3-201ENST00000449614 213 ntBASIC18.76■□□□□ 0.59
PHF8Q9UPP1 SNORA47-201ENST00000458862 138 ntBASIC18.76■□□□□ 0.59
PHF8Q9UPP1 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PHF8Q9UPP1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.75■□□□□ 0.59
PHF8Q9UPP1 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 FMO6P-201ENST00000236166 1620 ntBASIC18.75■□□□□ 0.59
PHF8Q9UPP1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF8Q9UPP1 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms