Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 AL109809.1-201ENST00000418979 1367 ntBASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.99■□□□□ 0.15
SYNPO2Q9UMS6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 AC103563.1-201ENST00000429316 123 ntBASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 GOLGA2P7-209ENST00000560408 745 ntBASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FAM187B2P-201ENST00000577135 713 ntBASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 AC011247.3-201ENST00000603297 438 ntBASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNPO2Q9UMS6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC020763.3-201ENST00000625095 2904 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 LINC02486-201ENST00000604157 3000 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 TYMSP2-201ENST00000589501 424 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC126755.5-201ENST00000622756 267 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AC138466.4-201ENST00000623965 852 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 AP000769.1-203ENST00000637245 208 ntBASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNPO2Q9UMS6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SYNPO2Q9UMS6 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms