Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC084752.1-201ENST00000509766 622 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC138701.2-201ENST00000553634 226 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AL132994.1-201ENST00000554098 400 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC140658.4-201ENST00000561990 352 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NDUFB10P1-201ENST00000567319 521 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RN7SL470P-201ENST00000583069 259 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC108673.3-201ENST00000609183 335 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC087392.5-201ENST00000612517 489 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC244517.3-201ENST00000616254 1235 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC105137.3-201ENST00000617588 984 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC013470.4-201ENST00000619978 986 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AL132780.4-201ENST00000624870 1135 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 HLA-C-210ENST00000640219 976 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC020910.6-201ENST00000623084 1459 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC025183.3-201ENST00000623526 1482 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GOLGA8EP-201ENST00000530246 1959 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PDXDC2P-206ENST00000534700 1315 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms