Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 RN7SL684P-201ENST00000465665 294 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC004923.3-201ENST00000527532 355 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 URB1-AS1-201ENST00000534991 831 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC023051.2-201ENST00000541141 460 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC010202.1-201ENST00000551181 405 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC245369.7-201ENST00000631386 350 ntBASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CRAMP1Q96RY5 AC140479.7-201ENST00000636301 2332 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 SDCBP2P1-201ENST00000416115 614 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 OR4A49P-201ENST00000527050 632 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AC123912.6-201ENST00000612657 315 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AL357143.1-203ENST00000639750 881 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CRAMP1Q96RY5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 RCC2P5-201ENST00000492126 1487 ntBASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 LINC02228-204ENST00000642115 2962 ntBASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 KRT18P44-201ENST00000416086 1285 ntBASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 INTS4P1-203ENST00000641008 3683 ntBASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CRAMP1Q96RY5 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms