Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KRT223P-202ENST00000449164 1292 ntBASIC13.14□□□□□ -0.31
HPS1Q92902 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HPS1Q92902 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HPS1Q92902 AC092451.2-201ENST00000538746 658 ntBASIC13.14□□□□□ -0.31
HPS1Q92902 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.14□□□□□ -0.31
HPS1Q92902 BRI3BPP1-201ENST00000594224 787 ntBASIC13.14□□□□□ -0.31
HPS1Q92902 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.14□□□□□ -0.31
HPS1Q92902 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 CU634019.7-201ENST00000624153 1185 ntBASIC13.14□□□□□ -0.31
HPS1Q92902 FP236241.2-201ENST00000624906 1185 ntBASIC13.14□□□□□ -0.31
HPS1Q92902 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC13.13□□□□□ -0.31
HPS1Q92902 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 AC125807.2-201ENST00000513358 3514 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 POM121L4P-202ENST00000427789 1891 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HPS1Q92902 AC084364.1-201ENST00000551967 1556 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HPS1Q92902 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 TMEM14DP-201ENST00000422205 345 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HPS1Q92902 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.13□□□□□ -0.31
HPS1Q92902 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.13□□□□□ -0.31
HPS1Q92902 SEPHS1P7-201ENST00000452995 1177 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 AC104989.1-201ENST00000519711 778 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.13□□□□□ -0.31
HPS1Q92902 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HPS1Q92902 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 AL022328.1-201ENST00000610050 478 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 AC072061.1-201ENST00000569710 2234 ntBASIC13.13□□□□□ -0.31
HPS1Q92902 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.13□□□□□ -0.31
HPS1Q92902 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.13□□□□□ -0.31
HPS1Q92902 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HPS1Q92902 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms