Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 RPSAP15-201ENST00000448168 861 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 NUP210P1-202ENST00000504322 710 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 AC116345.2-201ENST00000512837 523 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 MIR4754-201ENST00000582477 89 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 AL353770.1-201ENST00000614915 403 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 AC099521.3-201ENST00000624251 2938 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC12Q8WUD4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 BX679664.3-201ENST00000414070 555 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC026320.2-201ENST00000434379 478 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC113935.1-201ENST00000471722 555 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC114947.1-202ENST00000514136 344 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC061965.1-201ENST00000560524 1465 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 KRT18P8-201ENST00000581937 1246 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC091812.3-201ENST00000621362 345 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC130686.1-201ENST00000622936 2466 ntBASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC12Q8WUD4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 RCC2P1-201ENST00000452257 1476 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 KRT8P31-201ENST00000504812 1408 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AC245884.6-201ENST00000515672 1067 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 ALG1L13P-202ENST00000519320 584 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 AL109837.1-201ENST00000603272 613 ntBASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC12Q8WUD4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms