Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AC007274.2-201ENST00000421675 662 ntBASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 RTN3P1-201ENST00000536295 711 ntBASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AC093752.3-201ENST00000567343 901 ntBASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 BRD7P5-201ENST00000299197 1822 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 FMO6P-201ENST00000236166 1620 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 ELK2AP-201ENST00000392510 1007 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 RN7SL769P-201ENST00000469386 295 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 RN7SL530P-201ENST00000485097 298 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 AC116345.2-201ENST00000512837 523 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 AF254983.2-201ENST00000612331 135 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 AL353770.1-201ENST00000614915 403 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 MIR6769A-201ENST00000617340 73 ntBASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.49■□□□□ 0.23
SMARCC2Q8TAQ2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 AC004241.5-201ENST00000623870 2448 ntBASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 AC008620.2-201ENST00000510294 1569 ntBASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 AC079781.5-202ENST00000641784 3743 ntBASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.48■□□□□ 0.23
SMARCC2Q8TAQ2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms