Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 CLUHP2-201ENST00000426660 1303 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 AL445209.1-201ENST00000607269 3491 ntBASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM53Q6P2H8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 FAM8A4P-201ENST00000435433 1213 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 KLF2P4-201ENST00000451959 1225 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC079316.1-201ENST00000548397 411 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC244669.2-201ENST00000612320 853 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 RHOXF1P1-202ENST00000635473 501 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM53Q6P2H8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AC018529.2-202ENST00000611482 3087 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 IYD-208ENST00000500320 2158 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 ARSEP1-201ENST00000420443 635 ntBASIC13.07□□□□□ -0.32
TMEM53Q6P2H8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms