Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN20P56880 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 AC064801.2-201ENST00000625052 1303 ntBASIC13.01□□□□□ -0.33
CLDN20P56880 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN20P56880 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 AC020910.6-201ENST00000623084 1459 ntBASIC13.01□□□□□ -0.33
CLDN20P56880 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLDN20P56880 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN20P56880 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLDN20P56880 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 AP002761.4-201ENST00000565433 3361 ntBASIC13□□□□□ -0.33
CLDN20P56880 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CLDN20P56880 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 AC111170.3-201ENST00000624282 2464 ntBASIC13□□□□□ -0.33
CLDN20P56880 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13□□□□□ -0.33
CLDN20P56880 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 AC008132.1-202ENST00000342005 1389 ntBASIC13□□□□□ -0.33
CLDN20P56880 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 Z97180.1-201ENST00000445173 988 ntBASIC13□□□□□ -0.33
CLDN20P56880 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13□□□□□ -0.33
CLDN20P56880 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13□□□□□ -0.33
CLDN20P56880 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CLDN20P56880 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13□□□□□ -0.33
CLDN20P56880 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13□□□□□ -0.33
CLDN20P56880 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13□□□□□ -0.33
CLDN20P56880 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 AP001505.2-201ENST00000616815 443 ntBASIC13□□□□□ -0.33
CLDN20P56880 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13□□□□□ -0.33
CLDN20P56880 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDN20P56880 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13□□□□□ -0.33
CLDN20P56880 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN20P56880 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CLDN20P56880 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDN20P56880 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLDN20P56880 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDN20P56880 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms