Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKN2DP55273 RPS2P32-201ENST00000439199 892 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 RN7SL530P-201ENST00000485097 298 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 AC125604.1-201ENST00000496255 707 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN2DP55273 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN2DP55273 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKN2DP55273 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN2DP55273 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.93□□□□□ -0.18
CDKN2DP55273 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.93□□□□□ -0.18
CDKN2DP55273 AL451050.2-201ENST00000606967 682 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CDKN2DP55273 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKN2DP55273 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDKN2DP55273 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 AL355102.3-201ENST00000554299 1678 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 NUTM2HP-201ENST00000442076 2498 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDKN2DP55273 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN2DP55273 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDKN2DP55273 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN2DP55273 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.93□□□□□ -0.18
CDKN2DP55273 AL591122.2-201ENST00000624125 1853 ntBASIC13.93□□□□□ -0.18
CDKN2DP55273 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN2DP55273 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN2DP55273 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN2DP55273 AC020917.4-201ENST00000623994 1999 ntBASIC13.92□□□□□ -0.18
CDKN2DP55273 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CDKN2DP55273 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CDKN2DP55273 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.92□□□□□ -0.18
CDKN2DP55273 BRWD1P1-201ENST00000401091 371 ntBASIC13.92□□□□□ -0.18
CDKN2DP55273 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN2DP55273 AC116345.2-201ENST00000512837 523 ntBASIC13.92□□□□□ -0.18
CDKN2DP55273 AC005740.1-201ENST00000515639 522 ntBASIC13.92□□□□□ -0.18
CDKN2DP55273 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN2DP55273 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.92□□□□□ -0.18
CDKN2DP55273 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CDKN2DP55273 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDKN2DP55273 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN2DP55273 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN2DP55273 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN2DP55273 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN2DP55273 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN2DP55273 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN2DP55273 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
CDKN2DP55273 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN2DP55273 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN2DP55273 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN2DP55273 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN2DP55273 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms