Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.5■□□□□ 0.07
CDK7P50613 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 KRT18P15-201ENST00000458108 1291 ntBASIC15.5■□□□□ 0.07
CDK7P50613 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK7P50613 BAK1P2-201ENST00000532665 631 ntBASIC15.5■□□□□ 0.07
CDK7P50613 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.5■□□□□ 0.07
CDK7P50613 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.5■□□□□ 0.07
CDK7P50613 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.5■□□□□ 0.07
CDK7P50613 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK7P50613 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDK7P50613 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK7P50613 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDK7P50613 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.5■□□□□ 0.07
CDK7P50613 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.49■□□□□ 0.07
CDK7P50613 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDK7P50613 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDK7P50613 NHP2P1-201ENST00000335274 462 ntBASIC15.49■□□□□ 0.07
CDK7P50613 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.49■□□□□ 0.07
CDK7P50613 AC022080.1-201ENST00000366255 781 ntBASIC15.49■□□□□ 0.07
CDK7P50613 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 NRADDP-201ENST00000437305 691 ntBASIC15.49■□□□□ 0.07
CDK7P50613 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.49■□□□□ 0.07
CDK7P50613 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK7P50613 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK7P50613 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CDK7P50613 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK7P50613 TYMSP2-201ENST00000589501 424 ntBASIC15.49■□□□□ 0.07
CDK7P50613 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK7P50613 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK7P50613 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CDK7P50613 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK7P50613 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK7P50613 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms