Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.14■□□□□ 0.33
PDE6BP35913 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 PHBP10-201ENST00000416467 784 ntBASIC17.14■□□□□ 0.33
PDE6BP35913 AL359092.2-201ENST00000423330 585 ntBASIC17.14■□□□□ 0.33
PDE6BP35913 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 RN7SL578P-201ENST00000477781 283 ntBASIC17.14■□□□□ 0.33
PDE6BP35913 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.14■□□□□ 0.33
PDE6BP35913 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 RN7SL480P-201ENST00000581481 294 ntBASIC17.14■□□□□ 0.33
PDE6BP35913 CR392039.1-201ENST00000623217 204 ntBASIC17.14■□□□□ 0.33
PDE6BP35913 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.14■□□□□ 0.33
PDE6BP35913 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PDE6BP35913 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDE6BP35913 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 CICP14-201ENST00000629111 2732 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.13■□□□□ 0.33
PDE6BP35913 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.13■□□□□ 0.33
PDE6BP35913 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.13■□□□□ 0.33
PDE6BP35913 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 AHCYP3-201ENST00000420053 1279 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC17.13■□□□□ 0.33
PDE6BP35913 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC17.13■□□□□ 0.33
PDE6BP35913 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.13■□□□□ 0.33
PDE6BP35913 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.13■□□□□ 0.33
PDE6BP35913 AC020922.4-201ENST00000621389 339 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 AC233280.19-201ENST00000633223 136 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 AL139424.3-202ENST00000641619 917 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 AL008638.4-201ENST00000624792 1315 ntBASIC17.13■□□□□ 0.33
PDE6BP35913 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDE6BP35913 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.13■□□□□ 0.33
PDE6BP35913 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDE6BP35913 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.13■□□□□ 0.33
PDE6BP35913 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6BP35913 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDE6BP35913 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDE6BP35913 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 KRT18P33-201ENST00000398525 1043 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 CD37-203ENST00000426897 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 PGK1P2-201ENST00000431702 1214 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 MAGEA7P-201ENST00000436482 942 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 HNRNPA3P12-201ENST00000437410 1063 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6BP35913 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6BP35913 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6BP35913 AC008494.1-201ENST00000497612 796 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6BP35913 AC023051.2-201ENST00000541141 460 ntBASIC17.12■□□□□ 0.33
PDE6BP35913 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms