Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RXRBP28702 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RXRBP28702 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 GSTM2P1-201ENST00000405166 654 ntBASIC17.84■□□□□ 0.45
RXRBP28702 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC17.84■□□□□ 0.45
RXRBP28702 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.84■□□□□ 0.45
RXRBP28702 PEBP1P1-201ENST00000554856 510 ntBASIC17.84■□□□□ 0.45
RXRBP28702 AL512631.1-201ENST00000604086 840 ntBASIC17.84■□□□□ 0.45
RXRBP28702 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 MIR7848-201ENST00000617402 101 ntBASIC17.84■□□□□ 0.45
RXRBP28702 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RXRBP28702 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
RXRBP28702 FAM90A22P-201ENST00000400142 1395 ntBASIC17.83■□□□□ 0.45
RXRBP28702 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RXRBP28702 AC073585.1-201ENST00000368895 1328 ntBASIC17.83■□□□□ 0.44
RXRBP28702 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC17.83■□□□□ 0.44
RXRBP28702 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC17.83■□□□□ 0.44
RXRBP28702 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RXRBP28702 AC016304.1-201ENST00000476363 413 ntBASIC17.83■□□□□ 0.44
RXRBP28702 AC090095.1-201ENST00000519275 871 ntBASIC17.83■□□□□ 0.44
RXRBP28702 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RXRBP28702 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC17.83■□□□□ 0.44
RXRBP28702 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC17.83■□□□□ 0.44
RXRBP28702 U62317.4-201ENST00000609758 448 ntBASIC17.83■□□□□ 0.44
RXRBP28702 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.83■□□□□ 0.44
RXRBP28702 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RXRBP28702 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RXRBP28702 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RXRBP28702 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.83■□□□□ 0.44
RXRBP28702 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RXRBP28702 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RXRBP28702 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 AL390726.1-201ENST00000451357 202 ntBASIC17.82■□□□□ 0.44
RXRBP28702 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC17.82■□□□□ 0.44
RXRBP28702 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
RXRBP28702 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC17.82■□□□□ 0.44
RXRBP28702 EEF1GP2-201ENST00000509352 1243 ntBASIC17.82■□□□□ 0.44
RXRBP28702 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 AL606834.1-201ENST00000553836 1169 ntBASIC17.82■□□□□ 0.44
RXRBP28702 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC17.82■□□□□ 0.44
RXRBP28702 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 AC211476.2-201ENST00000608799 708 ntBASIC17.82■□□□□ 0.44
RXRBP28702 AC090093.1-201ENST00000611315 271 ntBASIC17.82■□□□□ 0.44
RXRBP28702 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms