Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 AL445250.1-201ENST00000641671 2259 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 AC025183.3-201ENST00000623526 1482 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.54□□□□□ -0.4
CTLA4P16410 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.54□□□□□ -0.4
CTLA4P16410 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 SERPINA13P-202ENST00000478994 924 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.54□□□□□ -0.4
CTLA4P16410 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.54□□□□□ -0.4
CTLA4P16410 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 FAM8A2P-201ENST00000528813 1142 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.54□□□□□ -0.4
CTLA4P16410 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.54□□□□□ -0.4
CTLA4P16410 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.54□□□□□ -0.4
CTLA4P16410 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 DGCR9-201ENST00000609630 2415 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 AC008620.2-201ENST00000510294 1569 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.54□□□□□ -0.4
CTLA4P16410 PCDHA5-203ENST00000614258 4248 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 AC138969.2-201ENST00000532739 9932 ntBASIC12.54□□□□□ -0.4
CTLA4P16410 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CTLA4P16410 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CTLA4P16410 CR383656.2-201ENST00000548656 2254 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CTLA4P16410 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.53□□□□□ -0.4
CTLA4P16410 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.53□□□□□ -0.4
CTLA4P16410 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC005740.2-201ENST00000511085 419 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.53□□□□□ -0.4
CTLA4P16410 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC013355.1-201ENST00000562625 723 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC093752.3-201ENST00000567343 901 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.53□□□□□ -0.4
CTLA4P16410 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms