Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 ST20-AS1-201ENST00000560255 4223 ntBASIC12.8□□□□□ -0.36
CCL3P10147 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 RPL3P2-204ENST00000413027 1203 ntBASIC12.8□□□□□ -0.36
CCL3P10147 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL3P10147 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL3P10147 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL3P10147 DPY19L2P5-201ENST00000456300 331 ntBASIC12.8□□□□□ -0.36
CCL3P10147 AC104784.1-201ENST00000473096 294 ntBASIC12.8□□□□□ -0.36
CCL3P10147 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.8□□□□□ -0.36
CCL3P10147 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL3P10147 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 U62317.3-201ENST00000608319 855 ntBASIC12.8□□□□□ -0.36
CCL3P10147 MIR7845-201ENST00000618396 99 ntBASIC12.8□□□□□ -0.36
CCL3P10147 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL3P10147 SBF1P1-201ENST00000444527 5631 ntBASIC12.8□□□□□ -0.36
CCL3P10147 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL3P10147 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3P10147 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL3P10147 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3P10147 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 AL928921.2-201ENST00000641325 2442 ntBASIC12.79□□□□□ -0.36
CCL3P10147 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 AC008620.2-201ENST00000510294 1569 ntBASIC12.79□□□□□ -0.36
CCL3P10147 KRT8P24-201ENST00000560290 1559 ntBASIC12.79□□□□□ -0.36
CCL3P10147 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.79□□□□□ -0.36
CCL3P10147 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 RN7SL767P-201ENST00000493013 295 ntBASIC12.79□□□□□ -0.36
CCL3P10147 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 AC068867.1-201ENST00000559855 150 ntBASIC12.79□□□□□ -0.36
CCL3P10147 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 RN7SL357P-201ENST00000581065 298 ntBASIC12.79□□□□□ -0.36
CCL3P10147 AC091769.1-201ENST00000619576 568 ntBASIC12.79□□□□□ -0.36
CCL3P10147 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL3P10147 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL3P10147 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 AC092978.1-202ENST00000637590 1327 ntBASIC12.79□□□□□ -0.36
CCL3P10147 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL3P10147 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.79□□□□□ -0.36
CCL3P10147 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3P10147 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3P10147 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3P10147 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3P10147 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3P10147 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL3P10147 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3P10147 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL3P10147 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3P10147 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms