Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.94□□□□□ -0.18
PDGFBP01127 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
PDGFBP01127 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.94□□□□□ -0.18
PDGFBP01127 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDGFBP01127 AC138035.3-201ENST00000622706 2791 ntBASIC13.94□□□□□ -0.18
PDGFBP01127 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.94□□□□□ -0.18
PDGFBP01127 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC026691.1-201ENST00000602502 2017 ntBASIC13.93□□□□□ -0.18
PDGFBP01127 AC011498.7-201ENST00000624986 2027 ntBASIC13.93□□□□□ -0.18
PDGFBP01127 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.93□□□□□ -0.18
PDGFBP01127 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.93□□□□□ -0.18
PDGFBP01127 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC099343.1-201ENST00000513481 609 ntBASIC13.93□□□□□ -0.18
PDGFBP01127 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PDGFBP01127 AC079331.1-201ENST00000623200 1200 ntBASIC13.93□□□□□ -0.18
PDGFBP01127 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 SFPQP1-201ENST00000446621 1786 ntBASIC13.93□□□□□ -0.18
PDGFBP01127 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDGFBP01127 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.93□□□□□ -0.18
PDGFBP01127 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDGFBP01127 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 AL139158.3-201ENST00000641212 1562 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PDGFBP01127 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 AL627095.1-201ENST00000414775 321 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.92□□□□□ -0.18
PDGFBP01127 HLA-W-207ENST00000439514 771 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 DUX4L31-201ENST00000446466 1136 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 RN7SL33P-201ENST00000462543 342 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 AC113398.1-201ENST00000464124 406 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 AC104115.1-201ENST00000484005 623 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.92□□□□□ -0.18
PDGFBP01127 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.92□□□□□ -0.18
PDGFBP01127 RN7SL202P-201ENST00000584410 262 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 MIR5193-201ENST00000584510 109 ntBASIC13.92□□□□□ -0.18
PDGFBP01127 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms