Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KRT8P1-201ENST00000557533 1207 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 MIR4750-201ENST00000584564 56 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 AC020922.3-201ENST00000595064 547 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.65□□□□□ -0.38
CNOT4O95628 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CNOT4O95628 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 FAM90A2P-201ENST00000511144 1395 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 FAM90A25P-201ENST00000528404 1395 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CNOT4O95628 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CNOT4O95628 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CNOT4O95628 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CNOT4O95628 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
CNOT4O95628 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CNOT4O95628 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CNOT4O95628 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CNOT4O95628 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.64□□□□□ -0.39
CNOT4O95628 USP17L6P-201ENST00000382470 1197 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 DUX4L50-201ENST00000455245 715 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 AC114947.1-202ENST00000514136 344 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 AL512310.5-201ENST00000551999 515 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 PHBP15-201ENST00000574228 665 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 MIR3147-201ENST00000577811 66 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 CCT8L1P-201ENST00000465400 1674 ntBASIC12.64□□□□□ -0.39
CNOT4O95628 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CNOT4O95628 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CNOT4O95628 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CNOT4O95628 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 SHMT1P1-201ENST00000419974 1312 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 KRT18P9-201ENST00000604826 1300 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms