Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 AC079178.1-201ENST00000420915 656 ntBASIC13.33□□□□□ -0.28
IFT52Q9Y366 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 AP002761.4-201ENST00000565433 3361 ntBASIC13.33□□□□□ -0.28
IFT52Q9Y366 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC244394.1-201ENST00000435000 1665 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AK2P2-201ENST00000439142 405 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC234783.1-201ENST00000441761 496 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC012441.2-201ENST00000444843 739 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 KRT18P15-201ENST00000458108 1291 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC100850.1-201ENST00000506768 649 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC009955.4-201ENST00000597192 544 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 AC244157.2-201ENST00000616239 1006 ntBASIC13.32□□□□□ -0.28
IFT52Q9Y366 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFT52Q9Y366 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
IFT52Q9Y366 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFT52Q9Y366 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IFT52Q9Y366 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms