Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 LINC00244-201ENST00000625073 613 ntBASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AC138761.6-201ENST00000583997 1423 ntBASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC073548.1-201ENST00000624088 1882 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 MIR1307-201ENST00000408840 149 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC025186.1-201ENST00000478174 870 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 VENTXP3-201ENST00000546480 773 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AP005264.5-201ENST00000590066 467 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC092573.1-201ENST00000433054 884 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ALG1L6P-201ENST00000515248 758 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC132825.4-202ENST00000578792 434 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AC011471.3-201ENST00000623576 402 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 AF013593.1-201ENST00000458074 1487 ntBASIC12.41□□□□□ -0.42
KIAA1549Q9HCM3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.4□□□□□ -0.42
KIAA1549Q9HCM3 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms