Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC006335.1-201ENST00000445200 547 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 NUP210P1-202ENST00000504322 710 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC091917.2-201ENST00000505002 744 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 RHOQP1-201ENST00000555758 579 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 KRT8P1-201ENST00000557533 1207 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AL021578.1-201ENST00000613646 709 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 MIR6769A-201ENST00000617340 73 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AC022726.2-201ENST00000634673 547 ntBASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD3Q7Z3D4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AC111170.3-201ENST00000624282 2464 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 KRT17P5-201ENST00000332088 839 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 ELK2AP-201ENST00000392510 1007 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SSR1P1-201ENST00000407630 814 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AC245884.6-201ENST00000515672 1067 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 ALG1L13P-202ENST00000519320 584 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 AC020922.3-201ENST00000595064 547 ntBASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD3Q7Z3D4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms