Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC073335.2-201ENST00000610177 3441 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 SPDYE7P-202ENST00000420373 878 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC015922.1-201ENST00000421102 1152 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 TLE1P1-201ENST00000422965 589 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC007969.1-201ENST00000433675 447 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 KRT8P48-201ENST00000515599 1220 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC243562.1-201ENST00000560672 389 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 MIR4469-201ENST00000583919 79 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 LINC02084-201ENST00000606069 1096 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC003101.2-201ENST00000612557 442 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC004840.1-201ENST00000636359 365 ntBASIC11□□□□□ -0.65
KCNIP4Q6PIL6 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
KCNIP4Q6PIL6 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC092117.1-201ENST00000621230 3250 ntBASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 HLA-K-203ENST00000430151 1046 ntBASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 HIST3H2BA-201ENST00000436555 524 ntBASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 SLC25A39P2-201ENST00000537614 270 ntBASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 RARRES2P9-201ENST00000565168 469 ntBASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
KCNIP4Q6PIL6 AC010327.4-202ENST00000591484 748 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms