Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 RN7SL173P-201ENST00000461853 292 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC104115.1-201ENST00000484005 623 ntBASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42BPAQ5VT25 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC020917.4-201ENST00000623994 1999 ntBASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 KRT8P6-201ENST00000399259 1207 ntBASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC105443.1-201ENST00000433754 712 ntBASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 AC015813.5-201ENST00000624641 1514 ntBASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42BPAQ5VT25 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AC026271.1-201ENST00000447794 1348 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AC011239.2-201ENST00000624820 1489 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 SNORA30.1-201ENST00000363193 129 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 POLR2LP1-206ENST00000444785 187 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AC114781.1-201ENST00000450559 1028 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 GYG1-209ENST00000483267 801 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 PCTP-206ENST00000573500 919 ntTSL 3 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AC136475.7-201ENST00000602949 592 ntBASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42BPAQ5VT25 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 CRIP1P2-201ENST00000425396 228 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AL161727.1-201ENST00000457409 530 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AC009812.1-201ENST00000605948 1059 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AL590556.2-202ENST00000636906 844 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 KRT8P24-201ENST00000560290 1559 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 RBMX2P5-201ENST00000424312 969 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AC092865.2-201ENST00000439409 971 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 AL356000.1-201ENST00000441073 1238 ntBASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC42BPAQ5VT25 CDC37P2-201ENST00000562287 1029 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms