Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 MIR122-201ENST00000385044 85 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 MIR574-201ENST00000385209 96 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC106883.1-201ENST00000418805 562 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC026410.3-201ENST00000514280 936 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 RN7SKP287-201ENST00000516546 266 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC044860.1-202ENST00000559481 777 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC107373.2-201ENST00000607735 490 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 AL596442.2-201ENST00000610240 980 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC010271.2-201ENST00000614440 588 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC073592.8-201ENST00000624126 511 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC097372.4-201ENST00000625025 466 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AL356118.1-201ENST00000635272 1078 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC087499.5-201ENST00000452760 1342 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 CICP16-201ENST00000502609 2813 ntBASIC11.01□□□□□ -0.65
LINC01559Q495D7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01559Q495D7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01559Q495D7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11□□□□□ -0.65
LINC01559Q495D7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11□□□□□ -0.65
LINC01559Q495D7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC01559Q495D7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01559Q495D7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01559Q495D7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11□□□□□ -0.65
LINC01559Q495D7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms