Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX3P78415 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
IRX3P78415 AC021305.1-201ENST00000520656 1514 ntBASIC16.53■□□□□ 0.24
IRX3P78415 AC023157.3-201ENST00000619086 2088 ntBASIC16.53■□□□□ 0.24
IRX3P78415 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX3P78415 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.53■□□□□ 0.24
IRX3P78415 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
IRX3P78415 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX3P78415 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IRX3P78415 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
IRX3P78415 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IRX3P78415 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX3P78415 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IRX3P78415 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
IRX3P78415 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
IRX3P78415 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.52■□□□□ 0.24
IRX3P78415 AL161932.2-201ENST00000435436 679 ntBASIC16.52■□□□□ 0.24
IRX3P78415 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.52■□□□□ 0.24
IRX3P78415 AC226150.1-201ENST00000544259 466 ntBASIC16.52■□□□□ 0.24
IRX3P78415 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IRX3P78415 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.52■□□□□ 0.24
IRX3P78415 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX3P78415 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.52■□□□□ 0.23
IRX3P78415 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX3P78415 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.52■□□□□ 0.23
IRX3P78415 DNM1P41-201ENST00000623634 3350 ntBASIC16.52■□□□□ 0.23
IRX3P78415 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX3P78415 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
IRX3P78415 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IRX3P78415 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.51■□□□□ 0.23
IRX3P78415 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 CTBP2P8-201ENST00000422584 1330 ntBASIC16.51■□□□□ 0.23
IRX3P78415 CES1P1-201ENST00000421606 1704 ntBASIC16.51■□□□□ 0.23
IRX3P78415 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IRX3P78415 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 RN7SL23P-201ENST00000484055 275 ntBASIC16.51■□□□□ 0.23
IRX3P78415 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 AL022344.2-201ENST00000568976 968 ntBASIC16.51■□□□□ 0.23
IRX3P78415 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 AC011247.3-201ENST00000603297 438 ntBASIC16.51■□□□□ 0.23
IRX3P78415 LINC00244-201ENST00000625073 613 ntBASIC16.51■□□□□ 0.23
IRX3P78415 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.51■□□□□ 0.23
IRX3P78415 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IRX3P78415 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX3P78415 AC018529.2-202ENST00000611482 3087 ntBASIC16.51■□□□□ 0.23
IRX3P78415 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IRX3P78415 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IRX3P78415 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms