Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 RCC2P1-201ENST00000452257 1476 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 AC020910.6-201ENST00000623084 1459 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CPT1AP50416 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 AF274858.1-201ENST00000406288 372 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 AL080243.1-201ENST00000423293 1060 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.47■□□□□ 0.07
CPT1AP50416 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.47■□□□□ 0.07
CPT1AP50416 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.47■□□□□ 0.07
CPT1AP50416 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
CPT1AP50416 NAV1-210ENST00000593583 726 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.47■□□□□ 0.07
CPT1AP50416 AP003392.6-201ENST00000607709 325 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 AC126755.5-201ENST00000622756 267 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CPT1AP50416 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 SALL4P6-201ENST00000429385 1691 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.47■□□□□ 0.07
CPT1AP50416 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPT1AP50416 AC097376.2-205ENST00000610159 5334 ntBASIC15.47■□□□□ 0.07
CPT1AP50416 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPT1AP50416 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.46■□□□□ 0.07
CPT1AP50416 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CPT1AP50416 U3.5-201ENST00000363448 216 ntBASIC15.46■□□□□ 0.07
CPT1AP50416 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CPT1AP50416 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.46■□□□□ 0.07
CPT1AP50416 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 AC079250.1-201ENST00000456046 531 ntBASIC15.46■□□□□ 0.07
CPT1AP50416 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 AL359219.1-201ENST00000556311 934 ntBASIC15.46■□□□□ 0.07
CPT1AP50416 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.46■□□□□ 0.07
CPT1AP50416 URAHP-205ENST00000610227 398 ntBASIC15.46■□□□□ 0.07
CPT1AP50416 AC018695.6-201ENST00000614011 534 ntBASIC15.46■□□□□ 0.07
CPT1AP50416 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPT1AP50416 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.46■□□□□ 0.07
CPT1AP50416 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.46■□□□□ 0.07
CPT1AP50416 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.46■□□□□ 0.06
CPT1AP50416 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPT1AP50416 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.46■□□□□ 0.06
CPT1AP50416 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms