Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CENPAP49450 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CENPAP49450 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.96□□□□□ -0.34
CENPAP49450 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CENPAP49450 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CENPAP49450 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CENPAP49450 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CENPAP49450 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
CENPAP49450 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
CENPAP49450 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CENPAP49450 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CENPAP49450 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.96□□□□□ -0.34
CENPAP49450 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CENPAP49450 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 AL136309.1-201ENST00000403917 691 ntBASIC12.95□□□□□ -0.34
CENPAP49450 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.95□□□□□ -0.34
CENPAP49450 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.95□□□□□ -0.34
CENPAP49450 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.95□□□□□ -0.34
CENPAP49450 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.95□□□□□ -0.34
CENPAP49450 AP005018.1-201ENST00000525475 301 ntBASIC12.95□□□□□ -0.34
CENPAP49450 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.95□□□□□ -0.34
CENPAP49450 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.95□□□□□ -0.34
CENPAP49450 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.95□□□□□ -0.34
CENPAP49450 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 AL365181.3-201ENST00000605886 3222 ntBASIC12.95□□□□□ -0.34
CENPAP49450 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CENPAP49450 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CENPAP49450 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CENPAP49450 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CENPAP49450 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.94□□□□□ -0.34
CENPAP49450 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.94□□□□□ -0.34
CENPAP49450 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.94□□□□□ -0.34
CENPAP49450 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.94□□□□□ -0.34
CENPAP49450 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.94□□□□□ -0.34
CENPAP49450 AP003171.2-201ENST00000528208 925 ntBASIC12.94□□□□□ -0.34
CENPAP49450 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.94□□□□□ -0.34
CENPAP49450 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.94□□□□□ -0.34
CENPAP49450 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CENPAP49450 PPY2P-201ENST00000582808 702 ntBASIC12.94□□□□□ -0.34
CENPAP49450 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 AC073413.1-201ENST00000603927 732 ntBASIC12.94□□□□□ -0.34
CENPAP49450 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CENPAP49450 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.94□□□□□ -0.34
CENPAP49450 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.94□□□□□ -0.34
CENPAP49450 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms