Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC108024.1-201ENST00000626286 1721 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 ACKR1-201ENST00000368121 1240 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-1P43699 BASP1P1-201ENST00000430708 665 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-1P43699 AL512638.1-201ENST00000457493 794 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 AL359711.2-201ENST00000563105 872 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.64□□□□□ -0.55
NKX2-1P43699 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-1P43699 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-1P43699 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-1P43699 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 AC107375.1-201ENST00000564464 2231 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 AL645937.6-201ENST00000641122 3727 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 AC002350.2-201ENST00000623894 1828 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
NKX2-1P43699 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.63□□□□□ -0.55
NKX2-1P43699 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 POM121L8P-201ENST00000417732 1281 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 POM121L9P-203ENST00000441984 1285 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
NKX2-1P43699 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.63□□□□□ -0.55
NKX2-1P43699 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.63□□□□□ -0.55
NKX2-1P43699 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.63□□□□□ -0.55
NKX2-1P43699 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 LINC02084-201ENST00000606069 1096 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 AC093512.1-201ENST00000617969 520 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 AL390754.1-201ENST00000619088 582 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 AL358781.1-202ENST00000321081 1360 ntBASIC11.63□□□□□ -0.55
NKX2-1P43699 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.63□□□□□ -0.55
NKX2-1P43699 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
NKX2-1P43699 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-1P43699 PI4KAP2-201ENST00000360806 2080 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms