Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC15.19■□□□□ 0.02
HTTP42858 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
HTTP42858 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.19■□□□□ 0.02
HTTP42858 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTTP42858 TFAM-201ENST00000373895 973 ntTSL 2 BASIC15.19■□□□□ 0.02
HTTP42858 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HTTP42858 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.19■□□□□ 0.02
HTTP42858 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC15.19■□□□□ 0.02
HTTP42858 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.19■□□□□ 0.02
HTTP42858 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC15.18■□□□□ 0.02
HTTP42858 RN7SL5P-201ENST00000581458 321 ntBASIC15.18■□□□□ 0.02
HTTP42858 AC091736.1-201ENST00000609370 305 ntBASIC15.18■□□□□ 0.02
HTTP42858 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
HTTP42858 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.18■□□□□ 0.02
HTTP42858 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HTTP42858 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 IL6RP1-201ENST00000417848 1273 ntBASIC15.18■□□□□ 0.02
HTTP42858 AC253536.1-201ENST00000437021 315 ntBASIC15.18■□□□□ 0.02
HTTP42858 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC15.18■□□□□ 0.02
HTTP42858 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC15.18■□□□□ 0.02
HTTP42858 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTTP42858 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HTTP42858 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HTTP42858 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 MRPS16P3-201ENST00000415961 374 ntBASIC15.17■□□□□ 0.02
HTTP42858 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 PRDX2P3-201ENST00000515779 586 ntBASIC15.17■□□□□ 0.02
HTTP42858 AP001979.1-201ENST00000529222 751 ntBASIC15.17■□□□□ 0.02
HTTP42858 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC15.17■□□□□ 0.02
HTTP42858 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.17■□□□□ 0.02
HTTP42858 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 AC024075.2-201ENST00000598112 1473 ntBASIC15.17■□□□□ 0.02
HTTP42858 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HTTP42858 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.17■□□□□ 0.02
HTTP42858 CDC20P1-201ENST00000488829 1500 ntBASIC15.17■□□□□ 0.02
HTTP42858 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HTTP42858 AP000343.1-201ENST00000440602 385 ntBASIC15.17■□□□□ 0.02
HTTP42858 FPGT-205ENST00000482102 561 ntTSL 4 BASIC15.17■□□□□ 0.02
HTTP42858 AC092535.4-201ENST00000609548 397 ntBASIC15.17■□□□□ 0.02
HTTP42858 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 FMO6P-201ENST00000236166 1620 ntBASIC15.16■□□□□ 0.02
HTTP42858 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HTTP42858 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HTTP42858 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HTTP42858 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HTTP42858 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC15.16■□□□□ 0.02
HTTP42858 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
HTTP42858 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC15.16■□□□□ 0.02
HTTP42858 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.16■□□□□ 0.02
HTTP42858 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC15.16■□□□□ 0.02
HTTP42858 AC073592.10-201ENST00000624789 597 ntBASIC15.16■□□□□ 0.02
HTTP42858 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTTP42858 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms