Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 DPM3-202ENST00000368399 517 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AC106794.1-201ENST00000506935 792 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
CTLA4P16410 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.56□□□□□ -0.4
CTLA4P16410 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 MIR3615-201ENST00000581999 87 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.56□□□□□ -0.4
CTLA4P16410 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.56□□□□□ -0.4
CTLA4P16410 AL132994.2-201ENST00000603120 687 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 AL136295.7-201ENST00000619226 1200 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.56□□□□□ -0.4
CTLA4P16410 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 AC004623.1-201ENST00000624592 2127 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AC114271.1-201ENST00000612689 2813 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 BRD7P5-201ENST00000299197 1822 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.55□□□□□ -0.4
CTLA4P16410 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 TSPY25P-201ENST00000429463 745 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 AC011742.3-201ENST00000439053 820 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 EIF4HP1-201ENST00000453115 687 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.55□□□□□ -0.4
CTLA4P16410 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.55□□□□□ -0.4
CTLA4P16410 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.55□□□□□ -0.4
CTLA4P16410 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 TUBB1P2-201ENST00000422712 1306 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 TUBB1P1-201ENST00000503144 1300 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 FMO6P-201ENST00000236166 1620 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CTLA4P16410 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTLA4P16410 LINC01165-201ENST00000445190 1623 ntBASIC12.55□□□□□ -0.4
CTLA4P16410 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CTLA4P16410 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTLA4P16410 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
CTLA4P16410 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms