Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
CCL4P13236 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CCL4P13236 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.21□□□□□ -0.3
CCL4P13236 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.21□□□□□ -0.3
CCL4P13236 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.21□□□□□ -0.3
CCL4P13236 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL4P13236 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCL4P13236 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCL4P13236 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 DKKL1P1-201ENST00000400550 698 ntBASIC13.2□□□□□ -0.3
CCL4P13236 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL4P13236 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL4P13236 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL4P13236 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCL4P13236 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.2□□□□□ -0.3
CCL4P13236 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 AC083801.1-201ENST00000491689 358 ntBASIC13.2□□□□□ -0.3
CCL4P13236 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL4P13236 AC068831.5-201ENST00000557387 328 ntBASIC13.2□□□□□ -0.3
CCL4P13236 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL4P13236 EIF5AP2-201ENST00000585668 1047 ntBASIC13.2□□□□□ -0.3
CCL4P13236 AC005777.1-201ENST00000588332 187 ntBASIC13.2□□□□□ -0.3
CCL4P13236 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCL4P13236 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 AP003392.6-201ENST00000607709 325 ntBASIC13.2□□□□□ -0.3
CCL4P13236 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL4P13236 AC073869.4-201ENST00000620841 800 ntBASIC13.2□□□□□ -0.3
CCL4P13236 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL4P13236 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL4P13236 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCL4P13236 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CCL4P13236 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL4P13236 AC106881.1-201ENST00000605849 3329 ntBASIC13.19□□□□□ -0.3
CCL4P13236 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 LINC02228-204ENST00000642115 2962 ntBASIC13.19□□□□□ -0.3
CCL4P13236 OR2I1P-209ENST00000641730 5365 ntBASIC13.19□□□□□ -0.3
CCL4P13236 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL4P13236 AC005722.1-201ENST00000431878 964 ntBASIC13.19□□□□□ -0.3
CCL4P13236 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.19□□□□□ -0.3
CCL4P13236 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL4P13236 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
CCL4P13236 AL359219.1-201ENST00000556311 934 ntBASIC13.19□□□□□ -0.3
CCL4P13236 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 AC126755.5-201ENST00000622756 267 ntBASIC13.19□□□□□ -0.3
CCL4P13236 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms