Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 MIR6089-201ENST00000616698 64 ntBASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 RP9P-202ENST00000450133 1212 ntBASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.03■□□□□ 0.96
COMMD3-BMI1R4GMX3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 AC242852.2-201ENST00000615738 1807 ntBASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COMMD3-BMI1R4GMX3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COMMD3-BMI1R4GMX3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 AC093536.1-201ENST00000569153 554 ntBASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.01■□□□□ 0.95
COMMD3-BMI1R4GMX3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD3-BMI1R4GMX3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 AC007029.1-201ENST00000604183 313 ntBASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD3-BMI1R4GMX3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 MIR4449-201ENST00000578365 66 ntBASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD3-BMI1R4GMX3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 HLA-L-211ENST00000482052 1765 ntBASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COMMD3-BMI1R4GMX3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD3-BMI1R4GMX3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms