Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCH2Q9Y6C5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 AL109923.1-201ENST00000618799 583 ntBASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PTCH2Q9Y6C5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCH2Q9Y6C5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 AL121749.1-202ENST00000609313 2153 ntBASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.71■■□□□ 1.71
PTCH2Q9Y6C5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PTCH2Q9Y6C5 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.7■■□□□ 1.71
PTCH2Q9Y6C5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
PTCH2Q9Y6C5 AC006970.2-201ENST00000450065 779 ntBASIC25.7■■□□□ 1.7
PTCH2Q9Y6C5 AP005435.1-201ENST00000529293 1178 ntBASIC25.7■■□□□ 1.7
PTCH2Q9Y6C5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.7■■□□□ 1.7
PTCH2Q9Y6C5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 AC141586.4-201ENST00000624558 1573 ntBASIC25.69■■□□□ 1.7
PTCH2Q9Y6C5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 CROCCP5-201ENST00000436658 830 ntBASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PTCH2Q9Y6C5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 AC010525.1-201ENST00000585559 441 ntBASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 AC091060.1-201ENST00000623524 1766 ntBASIC25.67■■□□□ 1.7
PTCH2Q9Y6C5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PTCH2Q9Y6C5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.65■■□□□ 1.7
PTCH2Q9Y6C5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 AC133637.1-201ENST00000624115 1537 ntBASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 BID-214ENST00000617586 542 ntTSL 5 BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PTCH2Q9Y6C5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PTCH2Q9Y6C5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.64■■□□□ 1.69
PTCH2Q9Y6C5 AC010501.1-201ENST00000606270 1962 ntBASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms