Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AF213884.3-201ENST00000563833 479 ntBASIC24.67■■□□□ 1.54
PCDHB2Q9Y5E7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.67■■□□□ 1.54
PCDHB2Q9Y5E7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB2Q9Y5E7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 AL138724.1-201ENST00000606771 1088 ntBASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB2Q9Y5E7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 MIR939-201ENST00000401314 82 ntBASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 AC006455.2-201ENST00000429931 906 ntBASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 AP001330.3-201ENST00000520123 633 ntBASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 AC011298.3-201ENST00000615796 283 ntBASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB2Q9Y5E7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PCDHB2Q9Y5E7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB2Q9Y5E7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHB2Q9Y5E7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHB2Q9Y5E7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHB2Q9Y5E7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB2Q9Y5E7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHB2Q9Y5E7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 AC009086.3-201ENST00000623486 1008 ntBASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB2Q9Y5E7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB2Q9Y5E7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 MIR3181-201ENST00000578512 73 ntBASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 ABCB10P4-201ENST00000566803 2184 ntBASIC24.59■■□□□ 1.53
PCDHB2Q9Y5E7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 AC105265.2-201ENST00000467189 838 ntBASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 AC091305.1-201ENST00000479476 895 ntBASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
PCDHB2Q9Y5E7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.58■■□□□ 1.52
PCDHB2Q9Y5E7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 AC136469.2-201ENST00000623944 1028 ntBASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB2Q9Y5E7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms