Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 AC006455.2-201ENST00000429931 906 ntBASIC21.26■□□□□ 0.99
LHX6Q9UPM6 MIR3181-201ENST00000578512 73 ntBASIC21.26■□□□□ 0.99
LHX6Q9UPM6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LHX6Q9UPM6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 KRT18P6-201ENST00000555540 1265 ntBASIC21.25■□□□□ 0.99
LHX6Q9UPM6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.25■□□□□ 0.99
LHX6Q9UPM6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LHX6Q9UPM6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 GPX1P1-201ENST00000388829 606 ntBASIC21.24■□□□□ 0.99
LHX6Q9UPM6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.24■□□□□ 0.99
LHX6Q9UPM6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 AC096887.2-201ENST00000623443 1957 ntBASIC21.23■□□□□ 0.99
LHX6Q9UPM6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.23■□□□□ 0.99
LHX6Q9UPM6 AC009102.2-201ENST00000606772 1639 ntBASIC21.22■□□□□ 0.99
LHX6Q9UPM6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LHX6Q9UPM6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.22■□□□□ 0.99
LHX6Q9UPM6 IGHV3-19-201ENST00000521488 291 ntBASIC21.22■□□□□ 0.99
LHX6Q9UPM6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.22■□□□□ 0.99
LHX6Q9UPM6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LHX6Q9UPM6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 AC009086.3-201ENST00000623486 1008 ntBASIC21.21■□□□□ 0.99
LHX6Q9UPM6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 AC097639.1-201ENST00000565519 1891 ntBASIC21.21■□□□□ 0.99
LHX6Q9UPM6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.21■□□□□ 0.99
LHX6Q9UPM6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 MIR4651-201ENST00000582622 73 ntBASIC21.2■□□□□ 0.98
LHX6Q9UPM6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 AC008687.6-201ENST00000596318 630 ntBASIC21.2■□□□□ 0.98
LHX6Q9UPM6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LHX6Q9UPM6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX6Q9UPM6 ERN1-208ENST00000606895 2068 ntBASIC21.19■□□□□ 0.98
LHX6Q9UPM6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX6Q9UPM6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms