Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 PKD1P6-201ENST00000343738 4769 ntBASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 DUX4L18-201ENST00000553347 1267 ntBASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 BHLHE23-202ENST00000612929 1109 ntBASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB4Q9UN71 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGB4Q9UN71 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB4Q9UN71 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGB4Q9UN71 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHGB4Q9UN71 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGB4Q9UN71 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGB4Q9UN71 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PCDHGB4Q9UN71 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PCDHGB4Q9UN71 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGB4Q9UN71 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGB4Q9UN71 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGB4Q9UN71 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB4Q9UN71 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB4Q9UN71 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 AC074183.2-201ENST00000623112 922 ntBASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHGB4Q9UN71 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 AL137060.1-201ENST00000618151 2648 ntBASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 LINC00526-201ENST00000581067 1875 ntBASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
PCDHGB4Q9UN71 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms