Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 YBX1P1-201ENST00000445822 960 ntBASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42EP3Q9UKI2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42EP3Q9UKI2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 AC009102.2-201ENST00000606772 1639 ntBASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42EP3Q9UKI2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 KRT18P5-201ENST00000436075 1291 ntBASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC42EP3Q9UKI2 AC010501.1-201ENST00000606270 1962 ntBASIC18.64■□□□□ 0.58
CDC42EP3Q9UKI2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.64■□□□□ 0.57
CDC42EP3Q9UKI2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42EP3Q9UKI2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 C17orf82-201ENST00000623772 1530 ntBASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42EP3Q9UKI2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 AC126544.1-201ENST00000580842 1059 ntBASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 AC009086.3-201ENST00000623486 1008 ntBASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42EP3Q9UKI2 AL139125.2-201ENST00000623134 1869 ntBASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 ID1-201ENST00000376105 1233 ntBASIC18.6■□□□□ 0.57
CDC42EP3Q9UKI2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms