Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 CD99P1-205ENST00000527459 561 ntBASIC22.44■■□□□ 1.18
NCDNQ9UBB6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.44■■□□□ 1.18
NCDNQ9UBB6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.43■■□□□ 1.18
NCDNQ9UBB6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.43■■□□□ 1.18
NCDNQ9UBB6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.42■■□□□ 1.18
NCDNQ9UBB6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NCDNQ9UBB6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.41■■□□□ 1.18
NCDNQ9UBB6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NCDNQ9UBB6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NCDNQ9UBB6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NCDNQ9UBB6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 BID-214ENST00000617586 542 ntTSL 5 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
NCDNQ9UBB6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 AL022069.1-201ENST00000568025 1636 ntBASIC22.38■■□□□ 1.17
NCDNQ9UBB6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NCDNQ9UBB6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.37■■□□□ 1.17
NCDNQ9UBB6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 TSPY20P-201ENST00000450910 630 ntBASIC22.37■■□□□ 1.17
NCDNQ9UBB6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NCDNQ9UBB6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms