Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALYQ9NYX4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALYQ9NYX4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.61■□□□□ 0.57
CALYQ9NYX4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.6■□□□□ 0.57
CALYQ9NYX4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALYQ9NYX4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALYQ9NYX4 AC079630.1-202ENST00000618127 1840 ntBASIC18.6■□□□□ 0.57
CALYQ9NYX4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALYQ9NYX4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALYQ9NYX4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALYQ9NYX4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.59■□□□□ 0.57
CALYQ9NYX4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CALYQ9NYX4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.58■□□□□ 0.57
CALYQ9NYX4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.58■□□□□ 0.57
CALYQ9NYX4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CALYQ9NYX4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CALYQ9NYX4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALYQ9NYX4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALYQ9NYX4 AC010997.5-201ENST00000609182 354 ntBASIC18.58■□□□□ 0.56
CALYQ9NYX4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.58■□□□□ 0.56
CALYQ9NYX4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CALYQ9NYX4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.58■□□□□ 0.56
CALYQ9NYX4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CALYQ9NYX4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CALYQ9NYX4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALYQ9NYX4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CALYQ9NYX4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.57■□□□□ 0.56
CALYQ9NYX4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.57■□□□□ 0.56
CALYQ9NYX4 AL035685.1-201ENST00000636663 812 ntBASIC18.57■□□□□ 0.56
CALYQ9NYX4 AC068473.5-201ENST00000616428 2072 ntBASIC18.57■□□□□ 0.56
CALYQ9NYX4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CALYQ9NYX4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CALYQ9NYX4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALYQ9NYX4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALYQ9NYX4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.56■□□□□ 0.56
CALYQ9NYX4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALYQ9NYX4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALYQ9NYX4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CALYQ9NYX4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.56■□□□□ 0.56
CALYQ9NYX4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALYQ9NYX4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CALYQ9NYX4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
CALYQ9NYX4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALYQ9NYX4 C9orf163-202ENST00000624034 2573 ntBASIC18.55■□□□□ 0.56
CALYQ9NYX4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
CALYQ9NYX4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.54■□□□□ 0.56
CALYQ9NYX4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.54■□□□□ 0.56
CALYQ9NYX4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALYQ9NYX4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.54■□□□□ 0.56
CALYQ9NYX4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALYQ9NYX4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CALYQ9NYX4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.52■□□□□ 0.56
CALYQ9NYX4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.52■□□□□ 0.56
CALYQ9NYX4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CALYQ9NYX4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALYQ9NYX4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.52■□□□□ 0.56
CALYQ9NYX4 UNC93B8-201ENST00000511903 705 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms