Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 KRT18P11-201ENST00000435214 1283 ntBASIC21.37■■□□□ 1.01
CHD8Q9HCK8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 AC011767.1-201ENST00000617410 1153 ntBASIC21.36■■□□□ 1.01
CHD8Q9HCK8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AC131274.2-201ENST00000580697 1507 ntBASIC21.34■■□□□ 1.01
CHD8Q9HCK8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 ABCB10P1-201ENST00000614297 2181 ntBASIC21.33■■□□□ 1.01
CHD8Q9HCK8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD8Q9HCK8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD8Q9HCK8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
CHD8Q9HCK8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHD8Q9HCK8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 AC142472.1-201ENST00000612013 1741 ntBASIC21.32■■□□□ 1
CHD8Q9HCK8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHD8Q9HCK8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHD8Q9HCK8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.31■■□□□ 1
CHD8Q9HCK8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CHD8Q9HCK8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.29■■□□□ 1
CHD8Q9HCK8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD8Q9HCK8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.29■■□□□ 1
CHD8Q9HCK8 AP006294.2-201ENST00000641667 209 ntBASIC21.29■■□□□ 1
CHD8Q9HCK8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD8Q9HCK8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHD8Q9HCK8 ECEL1P3-201ENST00000427961 737 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.28■■□□□ 1
CHD8Q9HCK8 DUSP5P2-201ENST00000426873 1033 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 FAM210CP-201ENST00000445714 574 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 AC092118.2-201ENST00000613495 667 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms