Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 KRT18P11-201ENST00000435214 1283 ntBASIC21.37■■□□□ 1.01
CHD8Q9HCK8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CHD8Q9HCK8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 AC011767.1-201ENST00000617410 1153 ntBASIC21.36■■□□□ 1.01
CHD8Q9HCK8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHD8Q9HCK8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD8Q9HCK8 AC131274.2-201ENST00000580697 1507 ntBASIC21.34■■□□□ 1.01
CHD8Q9HCK8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHD8Q9HCK8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 ABCB10P1-201ENST00000614297 2181 ntBASIC21.33■■□□□ 1.01
CHD8Q9HCK8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.33■■□□□ 1.01
CHD8Q9HCK8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD8Q9HCK8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD8Q9HCK8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
CHD8Q9HCK8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHD8Q9HCK8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 AC142472.1-201ENST00000612013 1741 ntBASIC21.32■■□□□ 1
CHD8Q9HCK8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.32■■□□□ 1
CHD8Q9HCK8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD8Q9HCK8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD8Q9HCK8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHD8Q9HCK8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHD8Q9HCK8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.31■■□□□ 1
CHD8Q9HCK8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.31■■□□□ 1
CHD8Q9HCK8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CHD8Q9HCK8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHD8Q9HCK8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHD8Q9HCK8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.29■■□□□ 1
CHD8Q9HCK8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD8Q9HCK8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.29■■□□□ 1
CHD8Q9HCK8 AP006294.2-201ENST00000641667 209 ntBASIC21.29■■□□□ 1
CHD8Q9HCK8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD8Q9HCK8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHD8Q9HCK8 ECEL1P3-201ENST00000427961 737 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.28■■□□□ 1
CHD8Q9HCK8 DUSP5P2-201ENST00000426873 1033 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 FAM210CP-201ENST00000445714 574 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.28■■□□□ 1
CHD8Q9HCK8 AC092118.2-201ENST00000613495 667 ntBASIC21.28■■□□□ 1
CHD8Q9HCK8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms