Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 MIR6084-201ENST00000622012 110 ntBASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.3■■□□□ 1.48
RC3H2Q9HBD1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H2Q9HBD1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H2Q9HBD1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 CCDC92B-201ENST00000575506 885 ntBASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 AL499627.2-201ENST00000606283 725 ntBASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 AL354811.1-201ENST00000610286 706 ntBASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RC3H2Q9HBD1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 AC133637.1-201ENST00000624115 1537 ntBASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H2Q9HBD1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H2Q9HBD1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H2Q9HBD1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.23■■□□□ 1.47
RC3H2Q9HBD1 TERF1P2-201ENST00000583350 1212 ntBASIC24.23■■□□□ 1.47
RC3H2Q9HBD1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RC3H2Q9HBD1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H2Q9HBD1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RC3H2Q9HBD1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 OR2I1P-207ENST00000453522 948 ntBASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 AC010525.1-201ENST00000585559 441 ntBASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
RC3H2Q9HBD1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms