Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VCXQ9H320 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCXQ9H320 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.45■■□□□ 1.02
VCXQ9H320 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
VCXQ9H320 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.45■■□□□ 1.02
VCXQ9H320 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCXQ9H320 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.44■■□□□ 1.02
VCXQ9H320 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VCXQ9H320 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VCXQ9H320 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCXQ9H320 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCXQ9H320 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCXQ9H320 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
VCXQ9H320 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.43■■□□□ 1.02
VCXQ9H320 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VCXQ9H320 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
VCXQ9H320 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCXQ9H320 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VCXQ9H320 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VCXQ9H320 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VCXQ9H320 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.41■■□□□ 1.02
VCXQ9H320 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VCXQ9H320 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
VCXQ9H320 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.41■■□□□ 1.02
VCXQ9H320 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VCXQ9H320 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.41■■□□□ 1.02
VCXQ9H320 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCXQ9H320 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.4■■□□□ 1.02
VCXQ9H320 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.4■■□□□ 1.02
VCXQ9H320 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.4■■□□□ 1.02
VCXQ9H320 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCXQ9H320 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VCXQ9H320 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
VCXQ9H320 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VCXQ9H320 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.39■■□□□ 1.02
VCXQ9H320 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
VCXQ9H320 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
VCXQ9H320 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
VCXQ9H320 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
VCXQ9H320 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VCXQ9H320 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.39■■□□□ 1.01
VCXQ9H320 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VCXQ9H320 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VCXQ9H320 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VCXQ9H320 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
VCXQ9H320 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.38■■□□□ 1.01
VCXQ9H320 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
VCXQ9H320 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.38■■□□□ 1.01
VCXQ9H320 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
VCXQ9H320 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
VCXQ9H320 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.38■■□□□ 1.01
VCXQ9H320 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VCXQ9H320 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.37■■□□□ 1.01
VCXQ9H320 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
VCXQ9H320 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.37■■□□□ 1.01
VCXQ9H320 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.37■■□□□ 1.01
VCXQ9H320 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCXQ9H320 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
VCXQ9H320 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.36■■□□□ 1.01
VCXQ9H320 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCXQ9H320 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms