Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC021231.2-201ENST00000594613 730 ntBASIC19.87■□□□□ 0.77
SLIRPQ9GZT3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLIRPQ9GZT3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLIRPQ9GZT3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLIRPQ9GZT3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLIRPQ9GZT3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 RNF165-205ENST00000588679 2904 ntBASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLIRPQ9GZT3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLIRPQ9GZT3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SLIRPQ9GZT3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SLIRPQ9GZT3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLIRPQ9GZT3 FAM99A-202ENST00000538190 1989 ntBASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLIRPQ9GZT3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLIRPQ9GZT3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.83■□□□□ 0.77
SLIRPQ9GZT3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.83■□□□□ 0.77
SLIRPQ9GZT3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SLIRPQ9GZT3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLIRPQ9GZT3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLIRPQ9GZT3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLIRPQ9GZT3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLIRPQ9GZT3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLIRPQ9GZT3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLIRPQ9GZT3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
SLIRPQ9GZT3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.8■□□□□ 0.76
SLIRPQ9GZT3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
SLIRPQ9GZT3 AC087741.3-201ENST00000624270 1347 ntBASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 HLA-V-202ENST00000446817 847 ntBASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms